PROTEIN PROPERTIES 

 

UNIPROT - a freely accessible database of protein sequence and functional information.

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PAXdb Protein Abundance Database

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ESPript- 'Easy Sequencing in PostScript'.

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Expasy Poteomics Tools

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Protein Calculator

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ProtScale

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Protein isoelectric point calculator

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Prot pi – Protein modifications

HIGH-THROUGHPUT DATA

INTERACTION & FUNCTIONAL ANALYSIS

 

GO - Gene ontology

GO term analysis

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DAVID

PANTHER

KEGG

 

BioGRID - Biological General Repository for Interaction Datasets

 

BIANA - Biologic Interaction and Network Analysis

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STRING -  Functional protein association networks

MOLECULAR BIOLOGY TOOLS

 

Biomath Calculator

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NEBcutter

 

Primer design

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Blast & Blast 2

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Reverse Complement

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DNA Translation

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Expasy Genomics Tools

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Multiple Sequence Alignment

PROTEIN LOCALIZATION

 

PSORT provides links to the PSORT family of programs  for subcellular localization prediction

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TargetP - Subcellular location of proteins

 

SignalP - Signal peptide prediction

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NLS prediction of nuclear localization signals

NLS_Mapper

NLStradamus

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NetNES nuclear export signals

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MitoFates

STATISTICS & DIAGRAMS

 

Online application for survival analysis (OASIS)

 

Perseus – Proteomic data analysis

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Analysis of genomic and proteomic data

 

Simple Interactive Statistical Analysis

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Statistics Calculators

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Graphpad quickcalcs

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Graphing with Excel

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Correlation

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Venn Diagram Plotter

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Biovenn